Element MoSeq

DataJoint Element for Motion Sequencing with Keypoint-MoSeq, from keypoint data extracted with DeepLabCut. DataJoint Elements collectively standardize and automate data collection and analysis for neuroscience experiments. Each Element is a modular pipeline for data storage and processing with corresponding database tables that can be combined with other Elements to assemble a fully functional pipeline.

Experiment Flowchart

Data Pipeline Diagram

Getting Started

• Please fork the repository

• Clone the repository to your computer

  git clone https://github.com/<enter_github_username>/element-moseq
  

• Install with pip

  pip install .
  

• Data Pipeline - Pipeline and table descriptions

• Tutorials - Start building your data pipeline

• Code Repository

Support

• If you need help getting started or run into any errors, please contact our team by email at support@datajoint.com.