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  • HMS Workshop: Data Workflows for Neuroscience Teams

    HMS Workshop: Data Workflows for Neuroscience Teams

    Hosted by the Harvard Medical School, the Data Workflows for Neuroscience Teams workshop brought together researchers and technical experts to explore best practices in scientific data management, pipeline design, and collaboration. The three-day event featured hands-on sessions, interactive discussions, and case studies—highlighting how tools like DataJoint Elements support scalable, reproducible neuroscience.

    Day 1 – Collaborative Workflows & NIH Requirements

    The workshop opened with sessions on designing collaborative neuroscience workflows and navigating NIH data management requirements. Dimitri Yatsenko led discussions on integrating code and data management strategies, followed by a hands-on coding session to build data pipelines from scratch.

    Day 2 – Multimodal Data Integration & Cloud Architecture

    Milagros Marín led a practical coding workshop on combining multiple data modalities using DataJoint Elements. Discussions with Dimitri Yatsenko, Thinh Nguyen, and Marín covered advanced topics including software architecture, technical infrastructure, and leveraging cloud computing for neuroscience workflows.

    Day 3 – Case Study: The Sabatini Lab Pipeline

    The final day focused on real-world application. Dr. Janet Wallace, Sr. Scientist in the Sabatini Lab, walked participants through the lab’s extensive data pipeline, exploring and visualizing data with Thinh Nguyen. Attendees had opportunities to engage in informal discussions and network with fellow researchers and developers.

    This workshop underscored the growing need for robust, transparent, and collaborative data practices in neuroscience—and demonstrated how teams can meet that challenge with modern tools and workflows.

    Thank you to all the organizers, speakers, and participants who made the event a success.

    Dr. Janet Wallace, Sr. Scientist in the lab of Bernardo Sabatini, introduces the lab's extensive data pipeline

    Milagros Marín, Ph.D., DataJoint SciOps Engineer
    Thinh Nguyen, Ph.D., DataJoint SciOps Lead

  • ODIN Symposium 2023

    ODIN Symposium 2023

    The Open Data in Neuroscience Initiative (ODIN) at MIT's McGovern Institute for Brain Research is dedicated to democratizing neuroscience research by fostering an open data ecosystem within and beyond MIT.

    ODIN aims to provide neuroscientists with powerful platforms and tools for data sharing, analysis, and interpretation, while collaborating with other open data initiatives and federally funded projects.

    In a spirit of transparency and collaboration, ODIN seeks to accelerate our understanding of neural systems and their impact on human health and behavior.

    This initiative will work in synergy with existing projects like DANDI, BRAIN Initiative Cell Atlas Network, and BRAIN CONNECTS, to create a culture of data sharing among scientists.

    ODIN's comprehensive approach includes co-developing toolkits, hosting annual workshops, and pushing the boundaries of neuroscience to unravel the mysteries of the human brain, inviting neuroscientists, data scientists, and stakeholders to join this transformative journey.

    For more information, please visit: https://odin.mit.edu.