Additional Resources

A collection of additional open-source tools for building and operating scientific data pipelines.

APIs

• DataJoint MATLAB

  ---

  A MATLAB client for defining, operating, and querying data pipelines.

  Legacy docs | Source code

• DataJoint Pharus

  ---

  A REST API server for interacting with DataJoint pipelines.

  Docs | Source code

Web Applications

• DataJoint LabBook

  ---

  A browser-based graphical user interface for data entry and navigation.

  Legacy docs | Source code

• DataJoint SciViz

  ---

  A framework for making low-code web apps for data visualization.

  Legacy docs | Source code

Container Images

graph
  %% Give short names
  dj["datajoint/datajoint"]
  base["datajoint/djbase"]
  lab["datajoint/djlab"]
  hub["datajoint/djlabhub"]
  test["datajoint/djtest"]
  conda3["datajoint/miniconda3"]
  mysql["datajoint/mysql"]
  %% Define connections
  conda3 --> base --> test;
  base --> dj;
  base --> lab --> hub;
  %% Add all to class
  class dj,base,lab,hub,test,conda3,mysql boxes;
  classDef boxes stroke:#333; %% Grey stroke for class

• datajoint/mysql

  ---

  MySQL server configured to work with DataJoint.

  Docker image | Source code

• datajoint/miniconda3

  ---

  Minimal Python Docker image with conda.

  Docker image | Legacy docs | Source code

• datajoint/djbase

  ---

  Minimal base Docker image with DataJoint Python dependencies installed.

  Docker image | Legacy docs | Source code

• datajoint/djtest

  ---

  Docker image for running tests related to DataJoint Python.

  Docker image | Legacy docs | Source code

• datajoint/datajoint

  ---

  Official DataJoint Docker image.

  Docker image | Source code

• datajoint/djlab

  ---

  Docker image optimized for running a JupyterLab environment with DataJoint Python.

  Docker image | Legacy docs | Source code

• datajoint/djlabhub

  ---

  Docker image optimized for deploying to JupyterHub a JupyterLab environment with DataJoint Python.

  Docker image | Legacy docs | Source code